There is a nice overview of reputation changes but it is definitely not complete - if you add up all changes you don't get the expected value. Adding deleted questions would probably be too complicated but bounties should definitely be possible and nice to have, it took me some time to notice that I can see them somewhere at all. There are also "special" reputation changes like 1 point for creating an account or 100 points on meta if your main account surpasses 200 points, seeing them there would be nice. And even then I am missing 50 points on my Stack Overflow account - no idea whether it is some special award that I am unaware of or something entirely different.
If you want a complete list, have a look at http://stackoverflow.com/reputation. You can use this to recalculate your rep if the values differ too much.