I know it's a bit late for the current elections, but Stack Overflow Unofficial Patch 1.8 now includes a workaround for this bug, loosely based on FEichinger's script.
The core of the workaround is the following jQuery code:
var base = ( $('#tabs .youarehere').attr('href') || "" ).replace( /#.*/, "" );
$('.comment-date').not(':has(a)').wrapInner( function () {
var id = $(this).closest('.comment').attr('id');
return $('<a class="comment-link"></a>').attr('href', base + '#' + id);
} );
The base
variable ensures that the links will lead to the correct tab (i.e. nominations), even if you haven't explicitly selected a tab. The full workaround included in SOUP also reapplies this fix whenever new comments are dynamically loaded, and also fixes the permalinks below each nomination post to always point at the correct tab.
Note that, due to missing JS support on the nomination pages, these permalinks look and behave somewhat differently than normal SE comment links. In particular, they don't have the same fancy highlight-and-fade behavior as normal comment links, they won't onebox in chat, and they may not work correctly if the comment being linked to is hidden by default.
Alas, these are not issues that can be easily fixed on the client side — even if I added the necessary code to SOUP, it wouldn't help anyone else who might follow the link while not using the same user script.